Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNAL--QLTPCAGAIIGSAAPTASCCSKMKE-----------QQPCMCQYARDPNLKQY--VDSPNGKKVMAACKVPVPSC
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17538 for 372 contacts (-47.1/contact) +
2D Compatibility (PS) -6109 + (NN) -340 + (LL) 560
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -29477.0 ( -79.24 by residue)
QMean score : 0.099
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: