Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDALQLSPCASAIIGNASPSASCCSRMKE-----------QQPCLCQYARDPNLQRY--VNSPNGKKVLAACHVPVPSC
2ALG Chain:A ((9-79))
----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13922 for 342 contacts (-40.7/contact) +
2D Compatibility (PS) -5706 + (NN) 803 + (LL) 684
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -22891.0 ( -66.93 by residue)
QMean score : 0.073
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: