Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRVLSEDKKVACIVTDLQVCLSALETPIPPSAECCKNLKIQKSCLCDYMENPSIEKYLEPARKVFAACGMPYPRC---
3DNV Chain:B ((4-74))
FQKIYSPTQLANAMKLVRQQNG------WTQSELAKKIGIKQA-TISNFENNPDNTTLTTFFKILQSLELSMTLCDAK
General information:
TITO was launched using:
RESULT:
Template:
3DNV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24480 for 447 contacts (-54.8/contact) +
2D Compatibility (PS) -7095 + (NN) -1017 + (LL) 596
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -34846.0 ( -77.96 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3DNV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DNV-query.scw
PDB file :
Tito_Scwrl_3DNV.pdb
: