Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------KTLILGEEVKATCDFTKFQVCKPEIIT-------GSPPSEECCEKLKEQ---------QSCLCAYLISPSISQYIGNAKRVIRACGIPFPNCS---
1IGN Chain:A ((94-242))
KRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLIRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEEPMKNLTPTPGNYNS
General information:
TITO was launched using:
RESULT:
Template:
1IGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27577 for 420 contacts (-65.7/contact) +
2D Compatibility (PS) -7985 + (NN) -5989 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -44151.0 ( -105.12 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1IGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IGN-query.scw
PDB file :
Tito_Scwrl_1IGN.pdb
: