Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-QNICPRVNRIVNPCVAYGLGRAPIAPCCRALNDLRFVDSRNLRRAACRCLVGVVNRNPGLRRNNRFQNVPGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
3THG Chain:A ((4-102))
PFTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPSF-------EQPKMTIDKLLGYGGMLVQEQ
General information:
TITO was launched using:
RESULT:
Template:
3THG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33403 for 607 contacts (-55.0/contact) +
2D Compatibility (PS) -10117 + (NN) -434 + (LL) 696
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -45358.0 ( -74.72 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_3THG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3THG-query.scw
PDB file :
Tito_Scwrl_3THG.pdb
: