Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPTCDTVQNILAPCAGFLTGQEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSIAYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKLPV
1S0Y Chain:B ((2-56))
------------------------PFIECHIATGLSVARKQQLIRDV----IDVTNKSIGSDPKIINVLLVEHAEANMSISGR----------
General information:
TITO was launched using:
RESULT:
Template:
1S0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189 for 280 contacts (-0.7/contact) +
2D Compatibility (PS) -5944 + (NN) -3275 + (LL) 1604
1D Compatibility (HY) 800 + (ID) 650
Total energy: -7654.0 ( -27.34 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_1S0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S0Y-query.scw
PDB file :
Tito_Scwrl_1S0Y.pdb
: