Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGQVNSALAPCITFLTKGG-------VPSGPCCSGVRGLLGA-------AKTTADRQAA-CNCLKAAAGSLHGLNQGNAAALPGRCGVSIPYKISTSTNCATIKF---------
2HW4 Chain:A ((18-141))
LYFQSMDLALIPDVDIDSDGVFKYVLIRVHSAESKEIVRGYKWAEYHADIYDKVSGDMQKQGCDCECLGGGRISHQSQDKKIHVYGYSMAYGPAQHAISTEKIKAKYPDYEVTWAN
General information:
TITO was launched using:
RESULT:
Template:
2HW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31351 for 563 contacts (-55.7/contact) +
2D Compatibility (PS) -9424 + (NN) 2227 + (LL) 0
1D Compatibility (HY) 0 + (ID) 1150
Total energy: -39698.0 ( -70.51 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2HW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HW4-query.scw
PDB file :
Tito_Scwrl_2HW4.pdb
: