Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------ITCGQVASN--ISPCLTYVKSGG----------------------AVPAACCSGIRNLNGMAKTTADRQAACNCLKQA--AGGIKGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVR--CMRQTRTN-----
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14773 for 616 contacts (-24.0/contact) +
2D Compatibility (PS) -8476 + (NN) 1178 + (LL) 652
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -23519.0 ( -38.18 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: