Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ITCGQVQSALVPCLSYLKTTGPTPPA--TCCNGVRTINNAAKTTADRRTACQCLKSAAGSVKGLNPTTVAGLPGKCGVNIPYKISLSTNCATVK-----------------------
3UUN Chain:A ((338-453))
EVNLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGT--GKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ
General information:
TITO was launched using:
RESULT:
Template:
3UUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20842 for 492 contacts (-42.4/contact) +
2D Compatibility (PS) -8750 + (NN) 7454 + (LL) 36
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -26502.0 ( -53.87 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_3UUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UUN-query.scw
PDB file :
Tito_Scwrl_3UUN.pdb
: