Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AISCGQVSSALSPCISYARG---------NGAKPPVACCSGVKRLAGAAQSTADKQA------------------ACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKVH-
4HR1 Chain:A ((3-120))
FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKERVDEIATAVNWDVYAQYARGDFNLLSDDEYKEIQKALLVLEDIKEQII-VEMLRVGLAQGQMG-----TLKISDYLDSLDS
General information:
TITO was launched using:
RESULT:
Template:
4HR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38080 for 544 contacts (-70.0/contact) +
2D Compatibility (PS) -8723 + (NN) 1679 + (LL) 176
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -51448.0 ( -94.57 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_4HR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR1-query.scw
PDB file :
Tito_Scwrl_4HR1.pdb
: