Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------AVPCSTVDMKAAACVGFATGKDSKPSSACCTGLQQLAQTVKSVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNI--KVGFPVSTATNCETIH---------------------------------------------------- |
4B8V Chain:A ((36-224)) | CGSTSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKS--CVS----TPAEPTETCVPGLPG-SYTIVSGDTLTNISQDFNITLDSLIAANTQIEN-PDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4339 for 450 contacts (-9.6/contact) +
2D Compatibility (PS) -8756 + (NN) -2945 + (LL) 824
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -20316.0 ( -45.15 by residue)
QMean score : 0.210
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