Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASSCNPSALSACAPALFGR-AVTLGCCASLRA-----------QQPCLCQYKRDPANRAYVNGPAAQRFTRACGLTQMKC
1BWO Chain:A ((8-78))
------SLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33764 for 356 contacts (-94.8/contact) +
2D Compatibility (PS) -5786 + (NN) 2067 + (LL) 188
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -39895.0 ( -112.06 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: