Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--GETRWAEAAVTCNPIELIPCLAAVMSSTPPSET----CCSRLRE----QTPCFCGYLNDPSLRQFADNPIIRTVGNACGVAYPQC--
2UUZ Chain:A ((49-137))
RLEAQSWARHYQQLAREEKEAELADDMEKGIPQHLFESLCIDHLQRHGASKKSITRAFDDDVEFQERMAEHIRYMVETIAHHQVDIDSE
General information:
TITO was launched using:
RESULT:
Template:
2UUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19662 for 385 contacts (-51.1/contact) +
2D Compatibility (PS) -7508 + (NN) 3238 + (LL) 0
1D Compatibility (HY) 400 + (ID) 600
Total energy: -24132.0 ( -62.68 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_2UUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUZ-query.scw
PDB file :
Tito_Scwrl_2UUZ.pdb
: