Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNK----------DCICNA-----L-----RAATTFTATCNLPSLDC
1T12 Chain:A ((3-76))
-TCGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVN----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26151 for 332 contacts (-78.8/contact) +
2D Compatibility (PS) -5632 + (NN) -3705 + (LL) 364
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -38974.0 ( -117.39 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: