Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVVPGATNTNPNAECCSALQSVEH----------DCLCNTL----------RIAARLPSQCNLA-------PVNCGNW
1T12 Chain:A ((3-89))
-TCGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28854 for 357 contacts (-80.8/contact) +
2D Compatibility (PS) -6147 + (NN) -3895 + (LL) 220
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -42676.0 ( -119.54 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: