Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLSNVQVCAAMVLPGSGRPNSECCAALQSTNR----------DCLCNALR------------AATSLPSLCNLPPVDCGINT
1T12 Chain:A ((3-75))
-TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGV---------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28319 for 312 contacts (-90.8/contact) +
2D Compatibility (PS) -5425 + (NN) -4876 + (LL) 8
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -43062.0 ( -138.02 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: