Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQ--------NPSCLCAVMLSNTAKMS-GADPQIAVTIPKRCNIATRPVGYKCGPYTLP
2ALG Chain:A ((3-79))
--------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL-SASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18085 for 434 contacts (-41.7/contact) +
2D Compatibility (PS) -6826 + (NN) -2255 + (LL) 316
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -30400.0 ( -70.05 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: