Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLTAVGNVRASVPP--------ACCSKVGALIKTAPKCLCAVLLSPLAMQAG--IKPG--IAITIPKRCNIKNRPVG--KKCGRYTVP---
2LZ0 Chain:A ((1-100))
-GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTGE--------DPSAYSAGDGLRDGADFLICVPEEALDRYRRDYFWQTYAAWIQPMEQ
General information:
TITO was launched using:
RESULT:
Template:
2LZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9638 for 476 contacts (-20.2/contact) +
2D Compatibility (PS) -9161 + (NN) -5154 + (LL) 1184
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -25669.0 ( -53.93 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_2LZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LZ0-query.scw
PDB file :
Tito_Scwrl_2LZ0.pdb
: