Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------AGECGRSTTPDMEAFKLAP---CASAAQDTTSPVSSQCCAQVKKMGQN--PPCLCAVMLSNTAKSSGVQPENAITIPKRCNIANRPVGYKCGAYTLP----------------------------------------------------------------------------------------------------------------------------------------- |
3K9G Chain:A ((26-267)) | KPKIITIASIKGGVGKSTSAIILATLLSKNNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENV------------------DIDSTIINVDNNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVESLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEILKTKDRFLGTISENKDYIKEYENILEIFLKKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7236 for 467 contacts (-15.5/contact) +
2D Compatibility (PS) -7928 + (NN) -2308 + (LL) 860
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -22162.0 ( -47.46 by residue)
QMean score : 0.150
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