Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----QISTSCTASMISS--FTPCLNFI---------TGSTSNGSSPTQGCCGAVKSLMSGSMDCACLIITA-----NVPFQLPINRTLALGLPRACNMGGVPVQCKGGN
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--SQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62530 for 510 contacts (-122.6/contact) +
2D Compatibility (PS) -8221 + (NN) 1065 + (LL) -224
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -73960.0 ( -145.02 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: