Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--DWAEDKKECSNQLVA---LSTCIPFV------------GGNTKVPDSTCCTNLRKKINQTKKCLCLLVAD---RNDPDLGFKVNATLALILPSICHAPSNASECPAEANKSSQ
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNL--MSQPCQM-------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27828 for 528 contacts (-52.7/contact) +
2D Compatibility (PS) -8275 + (NN) -1345 + (LL) 372
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -39826.0 ( -75.43 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: