Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCSLSQLSQCISAVTQGTNPPPLCCNEVASA--------D--FGCFCNLVSRGNYPPAYVSNAVLVPQKCGGEAYSKLKGKTCAGKSYHTGS
1SIY Chain:A ((6-76))
--VQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVN-------------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12583 for 420 contacts (-30.0/contact) +
2D Compatibility (PS) -6199 + (NN) -4026 + (LL) 684
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -23924.0 ( -56.96 by residue)
QMean score : 0.123
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: