Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASCDAT--ALSPCVGAIMLGGAVTPGCCARLKA-----------QQGCLCQYARNPSYAGY--VGSPRAQGVVQACGLPKPKC
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34886 for 372 contacts (-93.8/contact) +
2D Compatibility (PS) -6439 + (NN) 909 + (LL) 568
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -45698.0 ( -122.84 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: