Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----WTVNIPTPQSSCPLAN-PLSLNVCVDLLGLVHVVLGNPST-VECCDII-------------NGLGIDATVCLCT----AIHLKVLGLNV---DIPLAL---KLLVTC----GRELPNGLTC----------
1P5V Chain:B ((14-149))
VEPARITLTYKEGAPITIMDNGNIDTELLVGTLTLGGYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNHQFTTKVIGKDSRDFDISPKVNGENLVGDDVVLATGSQDFFVRSIGSKGGKLAAGKYTDAVTVTVSNQ
General information:
TITO was launched using:
RESULT:
Template:
1P5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66769 for 502 contacts (-133.0/contact) +
2D Compatibility (PS) -9617 + (NN) 5909 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -74077.0 ( -147.56 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1P5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5V-query.scw
PDB file :
Tito_Scwrl_1P5V.pdb
: