Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-DTT-CDNNINGILSNCKSTNPS------PACCSF-MRKITLECVCPRITSD----VTKYISLSSIL----TIAKICHRTLPHQYQCGSYLLP
2OD5 Chain:A ((7-97))
ETESMKTVRIREKIKKFLGDRPRNTAEILEHINSTMRHGTTSQQLGNVLSKDKDIVKVGYIKRSGILSGGYDICEWATRNWVAEH-CPEWTE-
General information:
TITO was launched using:
RESULT:
Template:
2OD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30959 for 386 contacts (-80.2/contact) +
2D Compatibility (PS) -7173 + (NN) 4706 + (LL) -20
1D Compatibility (HY) 0 + (ID) 650
Total energy: -34096.0 ( -88.33 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_2OD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OD5-query.scw
PDB file :
Tito_Scwrl_2OD5.pdb
: