Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTK-PSSKCCKFVRSAQL----------DCLCSKITKDVTKMITEHLLNTALKIAKQCNWELP----HNYQCGSYTFP
1AFH Chain:A ((2-92))
-----ISCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNA-AAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43510 for 557 contacts (-78.1/contact) +
2D Compatibility (PS) -7724 + (NN) -1514 + (LL) 384
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -55564.0 ( -99.76 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: