Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-DYCDLTTLLPCLSSVI-GDKPTPPSEECC---AVVRVVDPDC--VCGHV----GDDEGITGINVKLAAQIPKKCGRHVPKGFKCGEH-------------------------
1YOZ Chain:A ((9-124))
GHMLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKGEKKLDPEVINEIALYIDRVEKEV
General information:
TITO was launched using:
RESULT:
Template:
1YOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33378 for 479 contacts (-69.7/contact) +
2D Compatibility (PS) -7601 + (NN) -1567 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 500
Total energy: -51846.0 ( -108.24 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_1YOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YOZ-query.scw
PDB file :
Tito_Scwrl_1YOZ.pdb
: