Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDATNNMGKLLPCRQAAVKNGKDPKQLAGCCDAVKPFSGS-KDA----ADCLCQSLLAAQKVDKTVDLHSAIAIPAKCGIPVQ----ANLNCNGMAVPQH
1T12 Chain:A ((8-89))
-------TSNLAPCLAYLRNTG--P--LGRCCGGVKALVNSARTTEDRQIACTC-LKSAAGAI-SGINLGKAAGLPSTCGVNIPYKISPSTDCSK------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30084 for 470 contacts (-64.0/contact) +
2D Compatibility (PS) -7717 + (NN) -2811 + (LL) 944
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -44318.0 ( -94.29 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: