Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEETRLAIKACKPVVYGMDPSPACCERA--------RVTHVECVCPLITPKL-AALIDVNKAVRIIEGCGRKVPRH-YKCGSITTP
1GH5 Chain:A ((1-87))
MINRTDCNENSYLEIHN------NEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY
General information:
TITO was launched using:
RESULT:
Template:
1GH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18206 for 476 contacts (-38.2/contact) +
2D Compatibility (PS) -8037 + (NN) 4363 + (LL) 456
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -24274.0 ( -51.00 by residue)
QMean score : 0.136
(partial model without unconserved sides chains):
PDB file :
Tito_1GH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GH5-query.scw
PDB file :
Tito_Scwrl_1GH5.pdb
: