Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET------------------------------------------------------ |
| 4B8V Chain:A ((36-224)) | CGSTSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKSCVS----TPAEPTETCVPGLPG-SYTIVSGDTLTNISQDFNITLDSLIAANTQIENPDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9300 for 467 contacts (-19.9/contact) +
2D Compatibility (PS) -9277 + (NN) -6153 + (LL) 292
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -27588.0 ( -59.07 by residue)
QMean score : 0.286
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