Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPT--ELSSCVGAITSSTPPSKLCCSKIKE-----------QKPCLCQYLKNPNLKKF--VNSPNARKVASTCGTPIPKC
2ALG Chain:A ((2-79))
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11989 for 382 contacts (-31.4/contact) +
2D Compatibility (PS) -6334 + (NN) -702 + (LL) 508
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -25517.0 ( -66.80 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: