Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPQ--ELSSCFAAFTSSAPPSSTCCSKLKE-----------QKPCLCGYLKDPNFSQY--VNSSKAKRIASTCGVQFPNC
2ALG Chain:A ((2-79))
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14651 for 382 contacts (-38.4/contact) +
2D Compatibility (PS) -6187 + (NN) 1153 + (LL) 28
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -27357.0 ( -71.62 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: