Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------YCKESLHLCMQHLKLNDRPTWL-----------KCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG--------------------------------------------
4K0D Chain:A ((5-147))
IAASADAQLELIGPRAAAAASLESAVLHVSLTARAYALTPEPARMDALQAALRRLEGAAARFAALPKSPEGAALSGRILAAVPPFEKAAVALGTAVATGGDDSAIRAREATLPPMREELLSLLRTFGALQQAHDAGASHTILA
General information:
TITO was launched using:
RESULT:
Template:
4K0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22703 for 421 contacts (-53.9/contact) +
2D Compatibility (PS) -7193 + (NN) -1075 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 700
Total energy: -30071.0 ( -71.43 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_4K0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0D-query.scw
PDB file :
Tito_Scwrl_4K0D.pdb
: