Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
1PQC Chain:A ((12-250))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP-------RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---


General information:
TITO was launched using:
RESULT:

Template: 1PQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123171 for 1769 contacts (-69.6/contact) +
2D Compatibility (PS) -25577 + (NN) -20452 + (LL) 5372
1D Compatibility (HY) -34000 + (ID) 11600
Total energy: -209428.0 ( -118.39 by residue)
QMean score : 0.831

(partial model without unconserved sides chains):
PDB file : Tito_1PQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PQC-query.scw
PDB file : Tito_Scwrl_1PQC.pdb: