Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEEGKDLVDKINNINLIQQNEESEELNIGKVLA
3IYV Chain:A ((1468-1512))
------------------NNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAA
General information:
TITO was launched using:
RESULT:
Template:
3IYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 270481 for 990 contacts (273.2/contact) +
2D Compatibility (PS) -4629 + (NN) -1259 + (LL) 1488
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 262181.0 ( 264.83 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_3IYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IYV-query.scw
PDB file :
Tito_Scwrl_3IYV.pdb
: