Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADNLYLYKGSVKITEMTLNLNEAKIIVYEDSGGNKYTLDASGISTLTNIDDIKLSDLLEGKVKFIYQKKDSNAIQIKGLGNIISTLLATQKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAEKILPAKDGQKSILVEKLGGLLGEPGAVYGDSNPKITAKDFLAEKASLVKTDGSNIVT------QTDKGKALVEAILNAK--EPISNKEVKIVET----ELAKTFVKTADLGTPAVA---------GKVLDAKDGQKSILVEKLGRFLDTTSTEYSN--QTAK---VFSGEKGTKPTAEEVVTKLLANNKKDLTDEVAQNPGLRAAVTSNSGLRGTVIDNLKGDTDFKTDITIQVDAKDPAFQGFVREIISQPSFEIPTSDDAPLSWDWI
4RJJ Chain:A ((46-235))------------------------------------------------------------------------------------------------------------------------------------------------DALQDKG-PEIIVARHEQNAAFMAQAVGRLTGKPGVVLVTSGPGASN---LATGLLTANTEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPEAVTNAFRIASAGQAGAAFVSFPQDVVNEVTNTKN-VRAVAAPKLGPAADDAISAAIAKIQTAKLPVVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAGTLSRDLEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNINGDRTIIHLDEIIADIDHAY


General information:
TITO was launched using:
RESULT:

Template: 4RJJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 26893 for 994 contacts (27.1/contact) +
2D Compatibility (PS) -16382 + (NN) 5282 + (LL) 9996
1D Compatibility (HY) -2000 + (ID) 2450
Total energy: 21339.0 ( 21.47 by residue)
QMean score : 0.173

(partial model without unconserved sides chains):
PDB file : Tito_4RJJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RJJ-query.scw
PDB file : Tito_Scwrl_4RJJ.pdb: