Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIA-IYNETQIIFTDSPGIFSAETK--LEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTR-LRHTKTKCIFVINKIDLVKKPELKMTYKHLDLLYK----LKKIFTISALKSDGLSDL----MDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFE--EKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV |
| 3R9W Chain:A ((8-298)) | ----KVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWR--PRDEEIYQNFIKPLNKPVIVVINKIDKIGP--AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFP----EDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172628 for 2152 contacts (-80.2/contact) +
2D Compatibility (PS) -30480 + (NN) -10790 + (LL) 792
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -243356.0 ( -113.08 by residue)
QMean score : 0.492
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