Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILSPILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGS-----ITCFLMIAIVKKFTG--ENYEIWGWRLLFYF------CSIMGVIGFLTRYIM----EESLAYK-----------THDQNKSLSNS---------PFLELIRS--YKKAFMIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVRITVEITFGTSAV--LFAILS----DKVGRKNVMVLILIALA-CAGLPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVCELLPTKVRCTGFSLAHNISAGIFGGISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 4PYP Chain:A ((78-348)) | ----------------------------------------------IGSFSVGLFVNRFGRRNSMLMMNLLAFVS----AVLMGFSKLG-KSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPT-----------ALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFE--------KAGVQQPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPET--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87132 for 1373 contacts (-63.5/contact) +
2D Compatibility (PS) -22794 + (NN) -2477 + (LL) 4952
1D Compatibility (HY) -20000 + (ID) 3600
Total energy: -131051.0 ( -95.45 by residue)
QMean score : -0.013
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