Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSKTCNAIKRLLQKESSFVGKDENGNSYYESSEGKRWVMYSNVSEPTTVS------PEWHVWLHYTDDAMPVNSKKRKIKRIPNLTGTKDAYYPNQKIKNYYERWNPNN
1B2L Chain:A ((31-99))
-----------------------------------KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIA
General information:
TITO was launched using:
RESULT:
Template:
1B2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3032 for 290 contacts (10.5/contact) +
2D Compatibility (PS) -6591 + (NN) -1842 + (LL) 1592
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -9009.0 ( -31.07 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1B2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B2L-query.scw
PDB file :
Tito_Scwrl_1B2L.pdb
: