Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCR-LPGLESRS---PIRLIIDSQEKLKEKHNVVKTADKVTTWVIINKKIEKKIKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGNDAIPFIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
3ZPC Chain:A ((28-371)) | --DQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAGEQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIDTVIADDCQLNVRSLHNIDIETVAQPKRVILDRRGRLPLTAKILENPETV----MVMGPYRQELADLG--VIQLEIQP---------------------LKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMF-NADFEYMAQQLRFKLLDVIQLDQDIRLRLIPTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187327 for 2875 contacts (-65.2/contact) +
2D Compatibility (PS) -37140 + (NN) -18193 + (LL) 1620
1D Compatibility (HY) -27600 + (ID) 6250
Total energy: -274890.0 ( -95.61 by residue)
QMean score : 0.518
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