Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
1T4W Chain:A ((157-175))
----------VFLDDENGNEILHAYIKQVRIVAYPRRDWKNFCEREDAKQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
1T4W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1839 for 64 contacts (28.7/contact) +
2D Compatibility (PS) -1912 + (NN) 92 + (LL) 2128
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -353.0 ( -5.52 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1T4W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T4W-query.scw
PDB file :
Tito_Scwrl_1T4W.pdb
: