Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLKVFKSIFLFLVSILFVCPILSLVSILFTESTNSEWVISTLFPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEFSGPTQSLLREIFHWGKGDYWFPEIKSLGGGILVMGFSLYTYVYILVRSNLKNVSNSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAIDTFTTGIYRTWFLLHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWSIEKGFFIYGARFYNIIANSIGLSFITAMISVSIAIMIGC----TARKNKVINNIARLISLGYAIPNAVIAISIIIF--------------LSKISSFITQYFTEISLVGTVGALIYSYL-FRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
3PV0 Chain:F ((277-426)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRV--LLILPYAVPSF---ISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGL---LKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90777 for 741 contacts (-122.5/contact) +
2D Compatibility (PS) -13086 + (NN) 1095 + (LL) 27404
1D Compatibility (HY) -17600 + (ID) 1750
Total energy: -94714.0 ( -127.82 by residue)
QMean score : 0.205
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