Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISSQIGSGIFMLPISLAPYGTYSLISWAVSGLGAILLALVFALLCAKFPETGGPHVYVKHAFGP---TAAFFVGWTYWASSWVSSTAVIVASIGYLAPLFHNNIQNIRLFL-EIALILAIMLINLRGITTVGHVELLLMTVKITVLFAVPIAALLLFDRNNFVVSEEISNLTISQAFARSTLLTLWCFIGLEIVTASAGSVENPSKTIPRAIVFGTVFVAIIYF------INSLAIMGLING--NHLANSKAPYADVIKIILPGNWYLIISIVAFIVSVSSLNAWFLADGQVALGLAKDKLMPQFFAKRNKYGAPFCGIIINTLGILALLVLISSKNFAKQVTSIIDVSVVSFLFVYLTCCLAFLKVIIQEKNYYKFLIGGMAVLFCCWIIYETPMNTLLIASLFPLSGTPTYLLWYRKPTK |
| 3GI9 Chain:C ((44-361)) | --------------------------TFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSI--LLWMSYVISIALFAKGFAGYFLPLI-APINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLIL-GLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFF--LSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPF-------LGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLF--------NMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246240 for 2397 contacts (-102.7/contact) +
2D Compatibility (PS) -31053 + (NN) -9038 + (LL) 3456
1D Compatibility (HY) -32800 + (ID) 4300
Total energy: -319975.0 ( -133.49 by residue)
QMean score : 0.340
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