Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSY---LEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
1MZS Chain:A ((215-291)) | ----------------------------------KVAVTELAHIVDETLAANNLDR--------------SQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 47296 for 432 contacts (109.5/contact) +
2D Compatibility (PS) -7743 + (NN) -2278 + (LL) 8080
1D Compatibility (HY) 4400 + (ID) 300
Total energy: 49455.0 ( 114.48 by residue)
QMean score : 0.078
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