Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRER-KVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYF-NDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
1K8H Chain:A ((9-133))
---IAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIENHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNK--VKVLIALAKGKKLYDR---------------------
General information:
TITO was launched using:
RESULT:
Template:
1K8H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53185 for 819 contacts (-64.9/contact) +
2D Compatibility (PS) -12934 + (NN) 396 + (LL) 2080
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -80243.0 ( -97.98 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1K8H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K8H-query.scw
PDB file :
Tito_Scwrl_1K8H.pdb
: