Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKGIITNIGTIINTTIRSN-SDQIFHIKAQNLSSIHEGDSIACSGVCLTVVDIINDIFTVQISQETMKVSNLGAWKVGKKINLEQAMRLSDKIDGHLVHGHVDETAKILTINQNLGSHEIKLSCP-QELIKFVAKKGSVTLDGVSLTVNSVIGREFTVNIIPYTWQNTTFQYNKVNDYLNLEVDMIARYLDQLIQYKYN |
1I8D Chain:A ((1-185)) | MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1I8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93775 for 1431 contacts (-65.5/contact) +
2D Compatibility (PS) -19277 + (NN) 3286 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 3000
Total energy: -130366.0 ( -91.10 by residue)
QMean score : 0.396
|
|
|