Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKRSIVFDALLILCISFFPIHANESCSNDGQFVENLMLADESTCHKSRKYNGREVISVKDKKLDFYVSANSGKIYSDNSETFVNGIKAIGERVPTLVESRYGTIIKNMVADEIESVKKFDDEIDFQWLNSISLGYYAGENGRIDFETMYSKVNIKNGNSF-PIFDRSAGIFAFLLNFYYNPSI--QDTQIAPYVGLGIGPTVFRLRKINGSP---QNSMPLNVPWFAYQVKLGVSYSIIPEIKTFLGYRYFSIPIPI---------------ADDISTHNIEIGLIFNF |
2X27 Chain:X ((5-210)) | ------------------------------------------------------------HKAGDFIIRGGFATVDPDDSSSDIK----LD-----------G-------A----KQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLLDGKLADIKQLPPTLLLQYYPMGGTN-SAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10990 for 1436 contacts (-7.7/contact) +
2D Compatibility (PS) -19103 + (NN) 296 + (LL) 6804
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -27643.0 ( -19.25 by residue)
QMean score : 0.096
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