Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDC---NVTRMLIEKAKKGHKFGETWEDYYRSISDNKRISIYKNV
1F0Z Chain:A ((1-25))
----------------------MQILFNDQAMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWAQHIVQDG
General information:
TITO was launched using:
RESULT:
Template:
1F0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6811 for 105 contacts (-64.9/contact) +
2D Compatibility (PS) -1985 + (NN) 3193 + (LL) 944
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -7259.0 ( -69.13 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_1F0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F0Z-query.scw
PDB file :
Tito_Scwrl_1F0Z.pdb
: