Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVPKEMRDYTIGSGRSLLDIITEYFQELCEKSGFIKKEYRIERNVDNTFVLDRRVNEPAVTNNRKEIS
2KP7 Chain:A ((60-89))
----GKEAKILQHF-GDRLCRMLDEKLKQHLASGGD----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2146 for 145 contacts (-14.8/contact) +
2D Compatibility (PS) -3251 + (NN) -491 + (LL) 3328
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -4060.0 ( -28.00 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_2KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KP7-query.scw
PDB file :
Tito_Scwrl_2KP7.pdb
: