Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHIPVLLKEML------LQLSPQNGGIYVDATFGAGGYSKAILE--SADCKVYAID-RDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
| 4PON Chain:A ((7-82)) | -----MILKKILPYSKELLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQARTTLFHKSHDKIAKSLPPETHGKVAAAVFNLGNGSSTIKAIEQLLSIMKDEGLIVLVVYHGNDVLDFCRNLDQQAARVLTYGFINQQNDPPFIVAIEKKAQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22416 for 415 contacts (-54.0/contact) +
2D Compatibility (PS) -7267 + (NN) -2831 + (LL) 10084
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -28380.0 ( -68.39 by residue)
QMean score : 0.446
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